MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6019_ses-2_T1w.
  • Date and time: 2022-11-10, 17:14.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6728800192159463
cnr1.9496972052823156
efc0.5949637112191025
fber1566.4495259138753
fwhmavg4.2349733333333335
fwhmx4.10575
fwhmy4.80869
fwhmz3.79048
icvscsf0.20575088427456212
icvsgm0.41916414336221597
icvswm0.3750849723632219
inumed1.7072097063064575
inurange0.7254508495330809
qi10.0
qi20.0036244755808414945
rpvecsf23.11829434370946
rpvegm11.912112227426096
rpvewm15.714948125202529
sizex176
sizey256
sizez256
snrcsf3.189469419338655
snrgm9.088151738057629
snrtotal11.290135694716747
snrwm21.59278592675396
snrdcsf36.7738285806329
snrdgm80.27919600725244
snrdtotal72.28513495656243
snrdwm99.80238028180194
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk6.585819871591415
summarybgmad6.564336267253013
summarybgmean14.49567107122824
summarybgmedian12.822724532335997
summarybgn2549331.0
summarybgp054.31257551535964
summarybgp9532.31556586176157
summarybgstdv9.399546422462759
summarycsfk5.397054210089385
summarycsfmad101.87508882295259
summarycsfmean394.142163997197
summarycsfmedian368.46645203232765
summarycsfn30739.0
summarycsfp05250.64113885201516
summarycsfp95614.513260435313
summarycsfstdv115.52406061054351
summarygmk-0.12257369836006538
summarygmmad88.14965844596902
summarygmmean813.3954611092922
summarygmmedian804.3815851248801
summarygmn28137.0
summarygmp05682.2494465298951
summarygmp95973.0320382788777
summarygmstdv88.50724703585331
summarywmk0.5195818832045687
summarywmmad43.47807138050697
summarywmmean1000.2080387113024
summarywmmedian1000.0000105015934
summarywmn241299.0
summarywmp05924.7886935137212
summarywmp951077.3388647437096
summarywmstdv46.31166824760716
tpmoverlapcsf0.17226985096931458
tpmoverlapgm0.45221760869026184
tpmoverlapwm0.5005356073379517
wm2max0.4768751474724575
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime17:30:56.387500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0133914, 0.977327, 0.211311, -0.0456597, 0.210511, -0.976525]
ImageOrientationTextSag>Tra(2.4)>Cor(-1.3)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0385375
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber14
ShimSetting[2642, 5479, -7470, 157, -129, -934, 206, -147]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp277.505
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumfa29aa997f868b1ca1643a0335897a10
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.